Distinctive Phenotype Identification For Breast Cancer Genotypes Among Hereditary Breast Cancer Mutated Genes
Current Bioinformatics [Year];[Volume]:[Pages]
Md. Rafiul Hassan1†, Imran ul Haque1, Emad Ramadan1, Joarder Kamruzzaman2, and Adel F. Ahmed1
1 Information and Computer Science department, College of Computer Science and Engineering, King Fahd Univeristy of Petroleum and Minerals, Dhahran 31921
2 Gippsland School of Information Technology, Monash University
MATLAB code for our hybrid method with a one-window GUI software that runs the MATLAB code and displays the results. [Download rar file].
Transcription Factors batch and jar files with TRANSFAC dataset. [Download rar file].
GSEA results of our identified genes with 11 other studies. [Download rar file].
Note: Kindly see the README file in each archive (rar file) to see how to run the program/code.
List of identified genes for different threshold values [Download Excel file].
List of identified genes for different threshold values and diseases associated [Download Excel file ].
List of 8 important genes identified by our model [Download Excel file ].
Detailed Protein-Protein Interaction network of our identified genes with BRCA1 and BRCA2 [Download PDF file]. Detailed Protein-Protein Interaction network of immediate neighbours of BRCA1 and BRCA2 [Download PDF file]. Venn diagram showing our identified genes with other cancer studies [Download PDF file].